STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC85883.1DNA-binding transcriptional regulator, MarR family. (148 aa)    
Predicted Functional Partners:
SKC66594.1
Uncharacterized conserved protein, DUF983 family.
  
     0.637
SKC86259.1
Protein of unknown function.
  
     0.619
SKC84086.1
Osmoprotectant transport system permease protein.
  
  
 0.561
SKC40288.1
Magnesium chelatase subunit I.
  
     0.545
SKC82078.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.492
SKC85880.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.487
SKC40308.1
Von Willebrand factor type A domain-containing protein.
  
     0.464
SKC86323.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
  
  0.462
SKC71611.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.438
SKC85579.1
Transketolase.
  
  
  0.438
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.