STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC86047.1Por secretion system C-terminal sorting domain-containing protein. (970 aa)    
Predicted Functional Partners:
SKC81673.1
Hypothetical protein.
  
     0.637
SKC87577.1
Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.631
SKC45552.1
DNA-binding transcriptional regulator, MarR family.
  
     0.630
SKC87449.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
  
  0.621
SKC86048.1
Hypothetical protein.
       0.596
SKC82798.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
  
  0.595
SKC65336.1
Protein of unknown function.
  
     0.553
SKC86050.1
Alpha-L-arabinofuranosidase C-terminus.
 
     0.539
SKC45558.1
Outer membrane protein TolC.
  
     0.538
SKC58828.1
Hypothetical protein.
  
     0.537
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.