STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC86641.1Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
SKC58028.1
Hypothetical protein.
  
   0.962
SKC86299.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
   0.962
SKC86302.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
   0.962
SKC86286.1
Cytochrome c oxidase subunit 3.
    
   0.901
SKC86290.1
Cytochrome c oxidase subunit 3.
    
   0.901
SKC74465.1
LemA protein.
 
    0.841
SKC74806.1
Putative membrane protein.
 
     0.768
SKC81466.1
Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain.
  
  
 0.627
SKC48979.1
Hypothetical protein.
    
   0.520
SKC82137.1
Tetratricopeptide repeat-containing protein.
 
   0.445
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.