STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC87570.1Pectinesterase. (318 aa)    
Predicted Functional Partners:
SKC87581.1
Hypothetical protein.
  
 0.989
SKC87603.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
  
 0.988
SKC87584.1
Hypothetical protein.
  
 0.987
SKC83755.1
Acetyl esterase/lipase.
   
 0.929
SKC87574.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.916
SKC87600.1
Rhamnogalacturonyl hydrolase YesR.
    0.871
SKC87577.1
Listeria/Bacterioides repeat-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
 0.835
SKC87567.1
Pectinesterase.
 
    
0.783
SKC87596.1
Protein of unknown function.
 
     0.760
SKC87563.1
Cupin domain-containing protein.
 
     0.718
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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