STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC87756.1Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). (122 aa)    
Predicted Functional Partners:
SKC87760.1
Phosphatidylglycerophosphatase A.
  
    0.792
SKC87763.1
Myo-inositol-1-phosphate synthase.
       0.791
SKC87740.1
Fatty acid hydroxylase superfamily protein.
       0.737
SKC87744.1
Protein of unknown function; Manually curated.
       0.737
SKC87748.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Manually curated; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.737
SKC87752.1
CarboxypepD_reg-like domain-containing protein.
       0.737
SKC87737.1
PAP2 superfamily protein.
  
    0.694
SKC87775.1
Hypothetical protein.
       0.650
SKC87779.1
8-amino-7-oxononanoate synthase.
       0.646
SKC87772.1
Nucleoside-diphosphate-sugar epimerase.
       0.643
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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