STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC87794.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (185 aa)    
Predicted Functional Partners:
SKC84046.1
Glyoxalase family protein.
  
 
  0.759
SKC87791.1
Glycosyl hydrolases family 35.
       0.613
SKC87345.1
Nitrate/nitrite transport system permease protein.
 
 
  0.582
SKC87513.1
Acyl transferase domain-containing protein.
    
 0.580
SKC74277.1
Nitroreductase.
  
 
 0.562
SKC75628.1
Nitroreductase.
  
 
 0.562
SKC87334.1
Bicarbonate transport system ATP-binding protein.
 
 
 0.562
SKC87322.1
Rubredoxin.
    
 0.540
SKC87354.1
Nitrate/nitrite transport system substrate-binding protein.
  
 
  0.540
SKC45993.1
Mobilisation protein (MobC).
  
 
 0.537
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.