STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC88535.1Hypothetical protein. (866 aa)    
Predicted Functional Partners:
SKC88533.1
Arabinogalactan endo-1,4-beta-galactosidase.
 
     0.810
SKC88522.1
Two component regulator propeller.
 
     0.708
SKC88530.1
Arabinogalactan endo-1,4-beta-galactosidase.
 
     0.643
SKC54100.1
O-Glycosyl hydrolase.
  
  
 0.609
SKC87491.1
Hypothetical protein.
  
     0.555
SKC87584.1
Hypothetical protein.
  
     0.522
SKC54481.1
Alpha-galactosidase.
    
  0.502
SKC87493.1
Starch-binding associating with outer membrane.
  
     0.496
SKC63592.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.494
SKC63716.1
Putative binding domain-containing protein, N-terminal; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.483
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.