STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC88891.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SKC40942.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.763
SKC39370.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
 
  0.622
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.617
SKC82137.1
Tetratricopeptide repeat-containing protein.
     
 0.591
SKC88888.1
Hypothetical protein.
       0.584
SKC88885.1
Hypothetical protein.
       0.489
SKC58023.1
Endonuclease-8.
  
     0.425
SKC87149.1
Protein of unknown function.
  
     0.419
SKC88882.1
Hypothetical protein.
       0.418
SKC41166.1
Amidohydrolase, PncC family; Belongs to the CinA family.
 
  
 0.417
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.