STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC88962.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (319 aa)    
Predicted Functional Partners:
SKC57119.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SKC57144.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.998
SKC73484.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.995
SKC73480.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.993
SKC83546.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
 
 0.993
SKC83550.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.981
SKC55868.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.974
SKC72977.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.974
SKC79318.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.974
SKC88321.1
Chemotaxis protein MotB.
 
 
   0.930
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.