STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU14870.1Choline binding protein A. (286 aa)    
Predicted Functional Partners:
KXU13427.1
Choline binding protein A.
  
     0.739
KXU14233.1
Choline kinase.
  
     0.735
KXU12790.1
Choline binding protein A.
  
     0.723
KXU12247.1
Choline binding protein D; Overlaps another CDS with the same product name.
 
     0.719
KXU14234.1
Choline permease LicB.
  
     0.690
KXU14869.1
Hypothetical protein.
 
     0.661
KXU12795.1
Lipopolysaccharide cholinephosphotransferase LicD3.
  
     0.632
pabB
Para-aminobenzoate synthase, aminase component / Aminodeoxychorismate lyase.
       0.615
KXU12793.1
Lipopolysaccharide cholinephosphotransferase LicD1.
  
     0.534
KXU14235.1
Choline permease LicB.
  
     0.526
Your Current Organism:
Streptococcus infantis
NCBI taxonomy Id: 68892
Other names: ATCC 700779, CCUG 39817, CIP 105949, DSM 12492, GTC 849, JCM 10157, LMG 18720, LMG:18720, S. infantis, strain O-122
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