Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXU12527.1 | KXU13470.1 | SINDD18_01529 | SINDD18_00879 | Hypothetical protein. | Hypothetical protein. | 0.448 |
KXU12527.1 | KXU14867.1 | SINDD18_01529 | SINDD18_00227 | Hypothetical protein. | Zinc metalloprotease zmpB precursor. | 0.411 |
KXU13470.1 | KXU12527.1 | SINDD18_00879 | SINDD18_01529 | Hypothetical protein. | Hypothetical protein. | 0.448 |
KXU13470.1 | KXU13723.1 | SINDD18_00879 | SINDD18_00744 | Hypothetical protein. | Sortase A, LPXTG specific. | 0.731 |
KXU13470.1 | KXU13907.1 | SINDD18_00879 | SINDD18_00664 | Hypothetical protein. | Putative alpha/beta superfamily hydrolase. | 0.418 |
KXU13470.1 | KXU14548.1 | SINDD18_00879 | SINDD18_00404 | Hypothetical protein. | Hypothetical protein. | 0.516 |
KXU13470.1 | KXU14867.1 | SINDD18_00879 | SINDD18_00227 | Hypothetical protein. | Zinc metalloprotease zmpB precursor. | 0.411 |
KXU13470.1 | nagB | SINDD18_00879 | SINDD18_00880 | Hypothetical protein. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.436 |
KXU13470.1 | pyk | SINDD18_00879 | SINDD18_00850 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.514 |
KXU13723.1 | KXU13470.1 | SINDD18_00744 | SINDD18_00879 | Sortase A, LPXTG specific. | Hypothetical protein. | 0.731 |
KXU13723.1 | KXU14548.1 | SINDD18_00744 | SINDD18_00404 | Sortase A, LPXTG specific. | Hypothetical protein. | 0.478 |
KXU13907.1 | KXU13470.1 | SINDD18_00664 | SINDD18_00879 | Putative alpha/beta superfamily hydrolase. | Hypothetical protein. | 0.418 |
KXU14548.1 | KXU13470.1 | SINDD18_00404 | SINDD18_00879 | Hypothetical protein. | Hypothetical protein. | 0.516 |
KXU14548.1 | KXU13723.1 | SINDD18_00404 | SINDD18_00744 | Hypothetical protein. | Sortase A, LPXTG specific. | 0.478 |
KXU14867.1 | KXU12527.1 | SINDD18_00227 | SINDD18_01529 | Zinc metalloprotease zmpB precursor. | Hypothetical protein. | 0.411 |
KXU14867.1 | KXU13470.1 | SINDD18_00227 | SINDD18_00879 | Zinc metalloprotease zmpB precursor. | Hypothetical protein. | 0.411 |
nagB | KXU13470.1 | SINDD18_00880 | SINDD18_00879 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | Hypothetical protein. | 0.436 |
nagB | pyk | SINDD18_00880 | SINDD18_00850 | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.678 |
pyk | KXU13470.1 | SINDD18_00850 | SINDD18_00879 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.514 |
pyk | nagB | SINDD18_00850 | SINDD18_00880 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.678 |