STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU13224.1TrsE-like protein. (771 aa)    
Predicted Functional Partners:
KXU13222.1
Hypothetical protein; Tn5252, Orf23.
 
   
 0.918
KXU13220.1
Hypothetical protein.
 
  
 0.904
KXU13225.1
Hypothetical protein.
 
     0.836
KXU13229.1
SNF2 family protein.
 
     0.806
KXU12027.1
Hypothetical protein.
 
  
 0.805
KXU13223.1
Hypothetical protein.
       0.800
KXU14408.1
Relaxase; Tn5252.
 
   
 0.774
KXU12032.1
Hypothetical protein.
 
   
 0.773
KXU12031.1
Hypothetical protein.
  
     0.757
KXU12029.1
Hypothetical protein.
 
     0.756
Your Current Organism:
Streptococcus infantis
NCBI taxonomy Id: 68892
Other names: ATCC 700779, CCUG 39817, CIP 105949, DSM 12492, GTC 849, JCM 10157, LMG 18720, LMG:18720, S. infantis, strain O-122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.