Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXU12008.1 | KXU12009.1 | SINDD18_01899 | SINDD18_01900 | Hypothetical protein. | Hypothetical protein. | 0.838 |
KXU12008.1 | KXU12660.1 | SINDD18_01899 | SINDD18_01449 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXU12009.1 | KXU12008.1 | SINDD18_01900 | SINDD18_01899 | Hypothetical protein. | Hypothetical protein. | 0.838 |
KXU12009.1 | KXU12660.1 | SINDD18_01900 | SINDD18_01449 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXU12660.1 | KXU12008.1 | SINDD18_01449 | SINDD18_01899 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXU12660.1 | KXU12009.1 | SINDD18_01449 | SINDD18_01900 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXU12660.1 | KXU12661.1 | SINDD18_01449 | SINDD18_01450 | Hypothetical protein. | Phage protein. | 0.952 |
KXU12660.1 | KXU12662.1 | SINDD18_01449 | SINDD18_01451 | Hypothetical protein. | Hypothetical protein. | 0.800 |
KXU12660.1 | KXU14919.1 | SINDD18_01449 | SINDD18_00200 | Hypothetical protein. | Protein serine/threonine phosphatase PrpC, regulation of stationary phase. | 0.407 |
KXU12660.1 | glmS | SINDD18_01449 | SINDD18_01643 | Hypothetical protein. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.440 |
KXU12660.1 | gpsA | SINDD18_01449 | SINDD18_01196 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.418 |
KXU12661.1 | KXU12660.1 | SINDD18_01450 | SINDD18_01449 | Phage protein. | Hypothetical protein. | 0.952 |
KXU12661.1 | KXU12662.1 | SINDD18_01450 | SINDD18_01451 | Phage protein. | Hypothetical protein. | 0.800 |
KXU12662.1 | KXU12660.1 | SINDD18_01451 | SINDD18_01449 | Hypothetical protein. | Hypothetical protein. | 0.800 |
KXU12662.1 | KXU12661.1 | SINDD18_01451 | SINDD18_01450 | Hypothetical protein. | Phage protein. | 0.800 |
KXU14919.1 | KXU12660.1 | SINDD18_00200 | SINDD18_01449 | Protein serine/threonine phosphatase PrpC, regulation of stationary phase. | Hypothetical protein. | 0.407 |
glmS | KXU12660.1 | SINDD18_01643 | SINDD18_01449 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Hypothetical protein. | 0.440 |
gpsA | KXU12660.1 | SINDD18_01196 | SINDD18_01449 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.418 |