STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU12442.1Ribosomal RNA small subunit methyltransferase D. (179 aa)    
Predicted Functional Partners:
KXU12443.1
Phosphopantetheine adenylyltransferase.
 
  
 0.918
coaD
Lon-like protease with PDZ domain; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the peptidase S16 family.
       0.800
asnA
Aspartate--ammonia ligase.
       0.639
KXU12447.1
Competence-associated EpuA protein.
       0.547
KXU12445.1
Hypothetical protein.
       0.539
KXU11976.1
Hypothetical protein.
  
    0.530
KXU13120.1
Protein YidD.
  
    0.528
murA_1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.524
KXU12440.1
Membrane protein; Belongs to the BI1 family.
       0.473
KXU14772.1
Hypothetical protein.
  
    0.462
Your Current Organism:
Streptococcus infantis
NCBI taxonomy Id: 68892
Other names: ATCC 700779, CCUG 39817, CIP 105949, DSM 12492, GTC 849, JCM 10157, LMG 18720, LMG:18720, S. infantis, strain O-122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.