Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG17540.1 | AJG17541.1 | RR42_m0125 | RR42_m0126 | Allophanate hydrolase 2 subunit 1. | Allophanate hydrolase 2 subunit 2. | 0.999 |
AJG17540.1 | AJG17775.1 | RR42_m0125 | RR42_m0361 | Allophanate hydrolase 2 subunit 1. | Glutamate--cysteine ligase, divergent, of Alpha- and Beta-proteobacteria type. | 0.900 |
AJG17540.1 | AJG19224.1 | RR42_m0125 | RR42_m1829 | Allophanate hydrolase 2 subunit 1. | 5-oxoprolinase. | 0.918 |
AJG17540.1 | AJG20477.1 | RR42_m0125 | RR42_m3107 | Allophanate hydrolase 2 subunit 1. | Putative cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.903 |
AJG17540.1 | AJG21214.1 | RR42_m0125 | RR42_m3855 | Allophanate hydrolase 2 subunit 1. | Glutamate synthase [NADPH] small chain. | 0.825 |
AJG17540.1 | AJG21215.1 | RR42_m0125 | RR42_m3856 | Allophanate hydrolase 2 subunit 1. | Glutamate synthase [NADPH] large chain. | 0.820 |
AJG17540.1 | AJG21440.1 | RR42_m0125 | RR42_m4092 | Allophanate hydrolase 2 subunit 1. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.900 |
AJG17540.1 | AJG22801.1 | RR42_m0125 | RR42_s1213 | Allophanate hydrolase 2 subunit 1. | Urea carboxylase. | 0.948 |
AJG17540.1 | glsA | RR42_m0125 | RR42_s1412 | Allophanate hydrolase 2 subunit 1. | Glutaminase; Belongs to the glutaminase family. | 0.844 |
AJG17540.1 | pxpA | RR42_m0125 | RR42_m0127 | Allophanate hydrolase 2 subunit 1. | Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.999 |
AJG17541.1 | AJG17540.1 | RR42_m0126 | RR42_m0125 | Allophanate hydrolase 2 subunit 2. | Allophanate hydrolase 2 subunit 1. | 0.999 |
AJG17541.1 | AJG17775.1 | RR42_m0126 | RR42_m0361 | Allophanate hydrolase 2 subunit 2. | Glutamate--cysteine ligase, divergent, of Alpha- and Beta-proteobacteria type. | 0.900 |
AJG17541.1 | AJG19224.1 | RR42_m0126 | RR42_m1829 | Allophanate hydrolase 2 subunit 2. | 5-oxoprolinase. | 0.912 |
AJG17541.1 | AJG20477.1 | RR42_m0126 | RR42_m3107 | Allophanate hydrolase 2 subunit 2. | Putative cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.903 |
AJG17541.1 | AJG21214.1 | RR42_m0126 | RR42_m3855 | Allophanate hydrolase 2 subunit 2. | Glutamate synthase [NADPH] small chain. | 0.800 |
AJG17541.1 | AJG21215.1 | RR42_m0126 | RR42_m3856 | Allophanate hydrolase 2 subunit 2. | Glutamate synthase [NADPH] large chain. | 0.841 |
AJG17541.1 | AJG21440.1 | RR42_m0126 | RR42_m4092 | Allophanate hydrolase 2 subunit 2. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.900 |
AJG17541.1 | AJG22801.1 | RR42_m0126 | RR42_s1213 | Allophanate hydrolase 2 subunit 2. | Urea carboxylase. | 0.939 |
AJG17541.1 | glsA | RR42_m0126 | RR42_s1412 | Allophanate hydrolase 2 subunit 2. | Glutaminase; Belongs to the glutaminase family. | 0.800 |
AJG17541.1 | pxpA | RR42_m0126 | RR42_m0127 | Allophanate hydrolase 2 subunit 2. | Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.998 |
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