STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG17548.1ABC-type transport system involved in resistance to organic solvents, periplasmic component. (312 aa)    
Predicted Functional Partners:
AJG17549.1
Methionine ABC transporter ATP-binding protein.
 
 0.997
AJG17550.1
ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A.
 
 0.997
AJG17547.1
Putative lipoprotein.
 
 
 0.965
AJG21210.1
Putative ABC transporter, permease component YrbE.
  
 0.959
AJG21211.1
Putative ABC transporter, ATP-binding protein YrbF.
  
 0.952
AJG21209.1
Putative ABC transporter, periplasmic component YrbD.
     
 0.914
AJG21207.1
Putative ABC transporter, auxiliary component YrbC.
  
 0.898
AJG21938.1
Putative ABC transporter, auxiliary component YrbC.
  
 0.898
AJG23197.1
Putative ABC transporter, auxiliary component YrbC.
  
 0.898
AJG23976.1
Putative ABC transporter, auxiliary component YrbC.
  
 0.898
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.