STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG17750.1Phenylacetate-coenzyme A ligase. (416 aa)    
Predicted Functional Partners:
AJG21078.1
Phenylacetic acid degradation protein PaaD, thioesterase.
 
 
 0.944
AJG22200.1
Phenylacetate-CoA oxygenase, PaaG subunit.
  
 
 0.929
AJG23953.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.929
AJG22201.1
Phenylacetate-CoA oxygenase, PaaH subunit.
  
 
 0.927
AJG22202.1
Phenylacetate-CoA oxygenase, PaaI subunit.
  
 
 0.927
AJG21079.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.925
AJG22206.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.925
AJG22203.1
Phenylacetate-CoA oxygenase, PaaJ subunit.
    
 0.921
AJG22204.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.918
AJG19002.1
Amidase; Belongs to the amidase family.
    
 0.904
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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