STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG17923.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
AJG22630.1
Hypothetical protein co-occurring with RecR; FIG000557; Belongs to the LysR transcriptional regulatory family.
  
     0.744
AJG21671.1
Transcriptional regulator, LysR family.
  
     0.729
AJG20170.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.686
AJG21150.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.588
AJG17924.1
Short chain dehydrogenase.
 
     0.587
AJG22109.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.559
AJG20746.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.555
AJG23325.1
LysR-family transcriptional regulatory protein.
  
     0.550
AJG24227.1
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.541
AJG24479.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.538
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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