STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG18134.1ClpB protein; Belongs to the ClpA/ClpB family. (906 aa)    
Predicted Functional Partners:
AJG18136.1
Uncharacterized protein ImpC.
 
 
 0.955
AJG18135.1
Uncharacterized protein ImpB.
 
  
 0.940
AJG21853.1
Uncharacterized protein ImpC.
 
 
 0.916
AJG21848.1
ClpB protein; Belongs to the ClpA/ClpB family.
  
  
 
0.908
AJG18137.1
Uncharacterized protein ImpD.
 
  
 0.907
AJG20693.1
VgrG protein.
 
  
 0.876
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.868
AJG22599.1
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 
 0.868
AJG18130.1
Uncharacterized protein ImpH/VasB.
 
  
 0.861
AJG21854.1
Uncharacterized protein ImpB.
 
  
 0.859
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.