STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG18267.1Putative ATPase with chaperone activity, associated with Flp pilus assembly. (471 aa)    
Predicted Functional Partners:
AJG18266.1
Flp pilus assembly protein RcpC/CpaB.
 
    0.934
AJG18263.1
Von Willebrand factor type A domain protein, associated with Flp pilus assembly.
 
    0.885
AJG18260.1
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
 
    0.883
AJG18268.1
Type IV prepilin peptidase TadV/CpaA.
 
     0.882
AJG18258.1
Flp pilus assembly protein TadB.
 
    0.881
AJG18257.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
    0.879
AJG18265.1
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.
 
     0.854
AJG18261.1
TadZ/CpaE-like protein associated with Flp pilus assembly.
 
    0.814
AJG18259.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
     0.812
AJG18262.1
TadZ/CpaE-like protein associated with Flp pilus assembly.
 
    0.771
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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