STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG18937.1Polyhydroxyalkanoic acid synthase. (597 aa)    
Predicted Functional Partners:
AJG18939.1
Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.984
AJG20547.1
Poly-beta-hydroxyalkanoate depolymerase.
 
  
 0.971
AJG18642.1
Intracellular PHB depolymerase.
 
  
 0.965
AJG22669.1
Intracellular PHB depolymerase.
 
  
 0.965
AJG22675.1
Acetoacetyl-CoA reductase.
 
 
 0.964
AJG19748.1
Polyhydroxyalkanoic acid synthase.
  
  
0.924
AJG22677.1
Polyhydroxyalkanoic acid synthase.
  
  
 
0.904
AJG18940.1
PhbF.
 
   
 0.886
AJG18938.1
3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.800
AJG24314.1
Ferredoxin reductase.
 
   
 0.692
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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