Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG18642.1 | AJG18937.1 | RR42_m1236 | RR42_m1539 | Intracellular PHB depolymerase. | Polyhydroxyalkanoic acid synthase. | 0.965 |
AJG18642.1 | AJG18940.1 | RR42_m1236 | RR42_m1542 | Intracellular PHB depolymerase. | PhbF. | 0.465 |
AJG18642.1 | AJG19748.1 | RR42_m1236 | RR42_m2356 | Intracellular PHB depolymerase. | Polyhydroxyalkanoic acid synthase. | 0.958 |
AJG18642.1 | AJG20547.1 | RR42_m1236 | RR42_m3178 | Intracellular PHB depolymerase. | Poly-beta-hydroxyalkanoate depolymerase. | 0.908 |
AJG18642.1 | AJG22669.1 | RR42_m1236 | RR42_s1080 | Intracellular PHB depolymerase. | Intracellular PHB depolymerase. | 0.900 |
AJG18642.1 | AJG22677.1 | RR42_m1236 | RR42_s1088 | Intracellular PHB depolymerase. | Polyhydroxyalkanoic acid synthase. | 0.962 |
AJG18937.1 | AJG18642.1 | RR42_m1539 | RR42_m1236 | Polyhydroxyalkanoic acid synthase. | Intracellular PHB depolymerase. | 0.965 |
AJG18937.1 | AJG18938.1 | RR42_m1539 | RR42_m1540 | Polyhydroxyalkanoic acid synthase. | 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.800 |
AJG18937.1 | AJG18939.1 | RR42_m1539 | RR42_m1541 | Polyhydroxyalkanoic acid synthase. | Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.984 |
AJG18937.1 | AJG18940.1 | RR42_m1539 | RR42_m1542 | Polyhydroxyalkanoic acid synthase. | PhbF. | 0.886 |
AJG18937.1 | AJG19748.1 | RR42_m1539 | RR42_m2356 | Polyhydroxyalkanoic acid synthase. | Polyhydroxyalkanoic acid synthase. | 0.924 |
AJG18937.1 | AJG20547.1 | RR42_m1539 | RR42_m3178 | Polyhydroxyalkanoic acid synthase. | Poly-beta-hydroxyalkanoate depolymerase. | 0.971 |
AJG18937.1 | AJG22669.1 | RR42_m1539 | RR42_s1080 | Polyhydroxyalkanoic acid synthase. | Intracellular PHB depolymerase. | 0.965 |
AJG18937.1 | AJG22675.1 | RR42_m1539 | RR42_s1086 | Polyhydroxyalkanoic acid synthase. | Acetoacetyl-CoA reductase. | 0.964 |
AJG18937.1 | AJG22677.1 | RR42_m1539 | RR42_s1088 | Polyhydroxyalkanoic acid synthase. | Polyhydroxyalkanoic acid synthase. | 0.904 |
AJG18937.1 | AJG24314.1 | RR42_m1539 | RR42_s2733 | Polyhydroxyalkanoic acid synthase. | Ferredoxin reductase. | 0.692 |
AJG18938.1 | AJG18937.1 | RR42_m1540 | RR42_m1539 | 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Polyhydroxyalkanoic acid synthase. | 0.800 |
AJG18938.1 | AJG18939.1 | RR42_m1540 | RR42_m1541 | 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.910 |
AJG18938.1 | AJG18940.1 | RR42_m1540 | RR42_m1542 | 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | PhbF. | 0.640 |
AJG18938.1 | AJG19748.1 | RR42_m1540 | RR42_m2356 | 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Polyhydroxyalkanoic acid synthase. | 0.416 |
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