STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG19060.1Putative phage terminase. (428 aa)    
Predicted Functional Partners:
AJG19059.1
Hypothetical protein.
  
  
 0.869
AJG19061.1
62kDa structural protein.
 
   
 0.810
AJG19058.1
DNA modification methylase.
 
    0.749
AJG23662.1
Hypothetical protein; FIG00638667.
  
     0.629
AJG19063.1
Hypothetical protein; FIG00642126.
 
     0.594
AJG19441.1
Phage lysozyme.
 
  
 0.586
AJG22397.1
Transcriptional regulator, TetR family.
  
     0.571
AJG22396.1
Hypothetical protein; FIG01111792.
  
     0.529
AJG24940.1
Hypothetical protein; FIG01111792.
  
     0.513
AJG19062.1
Hypothetical protein; FIG00640540.
       0.494
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.