Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG18773.1 | AJG19139.1 | RR42_m1371 | RR42_m1742 | Putative integrase; Belongs to the 'phage' integrase family. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.454 |
AJG19139.1 | AJG18773.1 | RR42_m1742 | RR42_m1371 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Putative integrase; Belongs to the 'phage' integrase family. | 0.454 |
AJG19139.1 | AJG21154.1 | RR42_m1742 | RR42_m3794 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Phage integrase. | 0.465 |
AJG19139.1 | AJG22214.1 | RR42_m1742 | RR42_s0623 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes. | 0.439 |
AJG19139.1 | AJG24737.1 | RR42_m1742 | RR42_s3156 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Putative integrase/recombinase protein. | 0.484 |
AJG21154.1 | AJG19139.1 | RR42_m3794 | RR42_m1742 | Phage integrase. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.465 |
AJG22214.1 | AJG19139.1 | RR42_s0623 | RR42_m1742 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.439 |
AJG24737.1 | AJG19139.1 | RR42_s3156 | RR42_m1742 | Putative integrase/recombinase protein. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.484 |