STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG19162.1Putative lipid carrier protein. (150 aa)    
Predicted Functional Partners:
AJG19161.1
Putative protease; FIG139928.
 
  
 0.986
AJG19160.1
Putative protease; FIG139552.
 
  
 0.929
AJG19158.1
Nitrate/nitrite sensor protein.
 
     0.777
AJG19184.1
Putative transmembrane protein.
 
     0.717
AJG23809.1
Porin, Gram-negative type.
  
     0.668
AJG24490.1
Porin, Gram-negative type.
  
     0.643
AJG23528.1
Porin, Gram-negative type.
  
     0.628
AJG19185.1
Nitrate/nitrite sensor protein.
 
     0.600
AJG19163.1
Hypothetical protein; FIG00715063.
 
    0.585
AJG18475.1
Outer membrane protein (porin).
  
     0.541
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.