STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG19532.1D-3-phosphoglycerate dehydrogenase. (276 aa)    
Predicted Functional Partners:
AJG19671.1
UDP-glucose 4-epimerase.
 
 
 0.938
AJG19533.1
Glucarate dehydratase.
     
 0.798
AJG19531.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.771
AJG19530.1
Ribose operon repressor.
       0.763
AJG19529.1
Putative gluconate TRAP family transporter, DctM subunit.
  
  
 0.729
AJG19528.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.714
AJG23167.1
4-oxalomesaconate hydratase.
 
   
 0.681
AJG19534.1
Polyphosphate kinase.
       0.675
AJG22917.1
4-carboxy-4-hydroxy-2-oxoadipate aldolase.
 
   
 0.656
AJG22059.1
Hypothetical protein.
 
   
 0.535
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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