STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG19814.1D-aminopeptidase dipeptide-binding protein DppA. (270 aa)    
Predicted Functional Partners:
AJG19815.1
D-aminopeptidase.
 
   
 0.928
AJG19816.1
Dipeptide transport system permease protein DppC.
 
  
 0.845
AJG19817.1
Dipeptide transport system permease protein DppB.
 
  
 0.844
AJG19821.1
Transcriptional regulator RpiR in protein degradation cluster.
 
     0.775
AJG19818.1
Dipeptide-binding ABC transporter, periplasmic substrate-binding component.
 
     0.751
AJG19820.1
Isoaspartyl aminopeptidase or Asp-X dipeptidase.
 
     0.547
AJG19819.1
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
   
 0.544
AJG19577.1
Alkylhydroperoxidase AhpD domain protein.
  
     0.509
AJG19813.1
Hypothetical protein; FIG00977839.
       0.499
AJG21751.1
Hypothetical protein; FIG00974507.
 
  
 0.464
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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