STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG19852.1Outer membrane usher protein FIMD. (934 aa)    
Predicted Functional Partners:
AJG19851.1
Putative pilin chaperone.
 
 
 0.969
AJG19853.1
Chaperone protein fimC precursor.
 
 
 0.967
AJG19354.1
Putative fimbrial protein.
 
 
 0.947
AJG19353.1
Chaperone.
 
 
 0.945
AJG19855.1
Putative fimbrial protein.
 
 
 0.923
AJG19345.1
Hypothetical protein.
  
 
 0.768
AJG19349.1
Putative fimbrial component.
  
 
 0.768
AJG19350.1
Putative fimbrial component.
  
 
 0.768
AJG23947.1
Channel-forming transporter/cytolysins activator of TpsB family.
 
  
 0.728
AJG19344.1
Channel-forming transporter/cytolysins activator of TpsB family.
 
  
 0.716
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.