Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG17553.1 | AJG17832.1 | RR42_m0138 | RR42_m0419 | Hypothetical protein; FIG00975693. | Hypothetical protein; FIG00973964. | 0.714 |
AJG17553.1 | AJG18422.1 | RR42_m0138 | RR42_m1012 | Hypothetical protein; FIG00975693. | Protein phosphatase 2C-like. | 0.565 |
AJG17553.1 | AJG18423.1 | RR42_m0138 | RR42_m1013 | Hypothetical protein; FIG00975693. | Serine/threonine protein kinase. | 0.446 |
AJG17553.1 | AJG20017.1 | RR42_m0138 | RR42_m2631 | Hypothetical protein; FIG00975693. | Hypothetical protein; FIG00538108. | 0.742 |
AJG17553.1 | AJG20050.1 | RR42_m0138 | RR42_m2665 | Hypothetical protein; FIG00975693. | Type IV pilus biogenesis protein PilF. | 0.468 |
AJG17553.1 | AJG20290.1 | RR42_m0138 | RR42_m2918 | Hypothetical protein; FIG00975693. | Tfp pilus assembly protein FimV. | 0.767 |
AJG17707.1 | AJG20017.1 | RR42_m0292 | RR42_m2631 | Putative lipoprotein. | Hypothetical protein; FIG00538108. | 0.706 |
AJG17707.1 | AJG20290.1 | RR42_m0292 | RR42_m2918 | Putative lipoprotein. | Tfp pilus assembly protein FimV. | 0.516 |
AJG17832.1 | AJG17553.1 | RR42_m0419 | RR42_m0138 | Hypothetical protein; FIG00973964. | Hypothetical protein; FIG00975693. | 0.714 |
AJG17832.1 | AJG18422.1 | RR42_m0419 | RR42_m1012 | Hypothetical protein; FIG00973964. | Protein phosphatase 2C-like. | 0.718 |
AJG17832.1 | AJG18423.1 | RR42_m0419 | RR42_m1013 | Hypothetical protein; FIG00973964. | Serine/threonine protein kinase. | 0.723 |
AJG17832.1 | AJG20017.1 | RR42_m0419 | RR42_m2631 | Hypothetical protein; FIG00973964. | Hypothetical protein; FIG00538108. | 0.738 |
AJG17832.1 | AJG20050.1 | RR42_m0419 | RR42_m2665 | Hypothetical protein; FIG00973964. | Type IV pilus biogenesis protein PilF. | 0.669 |
AJG17832.1 | AJG20290.1 | RR42_m0419 | RR42_m2918 | Hypothetical protein; FIG00973964. | Tfp pilus assembly protein FimV. | 0.758 |
AJG17832.1 | AJG21221.1 | RR42_m0419 | RR42_m3862 | Hypothetical protein; FIG00973964. | Type IV pilus biogenesis protein PilP. | 0.716 |
AJG17832.1 | AJG21222.1 | RR42_m0419 | RR42_m3863 | Hypothetical protein; FIG00973964. | Type IV pilus biogenesis protein PilO. | 0.661 |
AJG18422.1 | AJG17553.1 | RR42_m1012 | RR42_m0138 | Protein phosphatase 2C-like. | Hypothetical protein; FIG00975693. | 0.565 |
AJG18422.1 | AJG17832.1 | RR42_m1012 | RR42_m0419 | Protein phosphatase 2C-like. | Hypothetical protein; FIG00973964. | 0.718 |
AJG18422.1 | AJG18423.1 | RR42_m1012 | RR42_m1013 | Protein phosphatase 2C-like. | Serine/threonine protein kinase. | 0.945 |
AJG18422.1 | AJG20017.1 | RR42_m1012 | RR42_m2631 | Protein phosphatase 2C-like. | Hypothetical protein; FIG00538108. | 0.729 |
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