STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG20017.1Hypothetical protein; FIG00538108. (187 aa)    
Predicted Functional Partners:
AJG20016.1
Nitrogen regulation protein NtrB.
       0.800
AJG20290.1
Tfp pilus assembly protein FimV.
  
     0.754
AJG17553.1
Hypothetical protein; FIG00975693.
 
     0.742
AJG17832.1
Hypothetical protein; FIG00973964.
  
     0.738
AJG18422.1
Protein phosphatase 2C-like.
  
     0.729
AJG20050.1
Type IV pilus biogenesis protein PilF.
  
     0.716
AJG18423.1
Serine/threonine protein kinase.
  
     0.715
AJG17707.1
Putative lipoprotein.
  
     0.706
AJG21221.1
Type IV pilus biogenesis protein PilP.
  
     0.697
AJG21222.1
Type IV pilus biogenesis protein PilO.
  
     0.690
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
Server load: low (18%) [HD]