STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG20286.1Adenine-specific methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. (302 aa)    
Predicted Functional Partners:
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.803
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.795
AJG24929.1
Putative transmembrane protein.
  
     0.617
AJG20553.1
Putative transmembrane protein.
  
     0.596
AJG20635.1
tRNA(Ile)-lysidine synthetase.
 
    0.592
AJG18482.1
Putative lipoprotein transmembrane.
 
     0.564
AJG21313.1
General secretion pathway protein L.
  
  
 0.562
AJG21304.1
Histone acetyltransferase HPA2-related acetyltransferase.
 
   
 0.551
AJG20312.1
Putative signal peptide protein.
  
     0.541
AJG18364.1
Putative transmembrane protein.
 
     0.532
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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