STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG20707.1Uricase (urate oxidase). (311 aa)    
Predicted Functional Partners:
AJG18493.1
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase.
 
  0.997
AJG17481.1
Hydantoin racemase.
 
  
  0.935
AJG18996.1
N-carbamoyl-L-amino acid hydrolase.
    
 0.907
AJG21369.1
N-carbamoyl-L-amino acid hydrolase.
    
 0.907
AJG18494.1
Uricase (urate oxidase).
  
  
 
0.905
AJG23555.1
Allantoinase.
    
  0.904
AJG20708.1
Ureidoglycolate hydrolase.
 
     0.883
AJG18497.1
Transthyretin family protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.850
AJG18498.1
Conserved hypothetical membrane protein.
 
    0.770
AJG18507.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.748
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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