STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG21220.1Type IV pilus biogenesis protein PilQ. (724 aa)    
Predicted Functional Partners:
AJG21221.1
Type IV pilus biogenesis protein PilP.
 
 
 0.996
AJG21223.1
Type IV pilus biogenesis protein PilN.
 
 
 0.996
AJG21224.1
Type IV pilus biogenesis protein PilM.
 
 
 0.992
AJG21222.1
Type IV pilus biogenesis protein PilO.
 
 
 0.991
AJG21519.1
Uncharacterized protein with LysM domain; COG1652.
 
 
 
 0.946
AJG21026.1
Type IV fimbrial assembly protein PilC.
 
 
 
 0.867
AJG21025.1
Type IV fimbrial assembly, ATPase PilB.
 
 
 
 0.852
AJG19589.1
Type IV pilus biogenesis protein PilZ.
  
   
 0.819
AJG20897.1
Twitching motility protein PilT.
 
   
 0.816
AJG20290.1
Tfp pilus assembly protein FimV.
 
  
 0.812
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.