STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG21450.1Succinyl-CoA synthetase, alpha subunit-related enzyme. (143 aa)    
Predicted Functional Partners:
AJG21451.1
Putative transmembrane protein.
       0.785
AJG17624.1
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
 
    0.672
fur
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
    0.593
fur-2
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
    0.593
AJG21449.1
Esterase/lipase.
       0.590
AJG24058.1
O-acetylhomoserine sulfhydrylase.
      0.550
AJG18740.1
O-acetylhomoserine sulfhydrylase.
      0.546
hemE
Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.505
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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