Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG19979.1 | AJG21584.1 | RR42_m2593 | RR42_m4237 | Sterol desaturase. | O-antigen acetylase. | 0.410 |
AJG19979.1 | AJG24171.1 | RR42_m2593 | RR42_s2589 | Sterol desaturase. | Sensory box/GGDEF family protein. | 0.410 |
AJG21583.1 | AJG21584.1 | RR42_m4236 | RR42_m4237 | Hypothetical protein. | O-antigen acetylase. | 0.506 |
AJG21584.1 | AJG19979.1 | RR42_m4237 | RR42_m2593 | O-antigen acetylase. | Sterol desaturase. | 0.410 |
AJG21584.1 | AJG21583.1 | RR42_m4237 | RR42_m4236 | O-antigen acetylase. | Hypothetical protein. | 0.506 |
AJG21584.1 | AJG21585.1 | RR42_m4237 | RR42_m4238 | O-antigen acetylase. | Acyltransferase family protein. | 0.630 |
AJG21584.1 | AJG24171.1 | RR42_m4237 | RR42_s2589 | O-antigen acetylase. | Sensory box/GGDEF family protein. | 0.425 |
AJG21585.1 | AJG21584.1 | RR42_m4238 | RR42_m4237 | Acyltransferase family protein. | O-antigen acetylase. | 0.630 |
AJG21585.1 | AJG24171.1 | RR42_m4238 | RR42_s2589 | Acyltransferase family protein. | Sensory box/GGDEF family protein. | 0.425 |
AJG24171.1 | AJG19979.1 | RR42_s2589 | RR42_m2593 | Sensory box/GGDEF family protein. | Sterol desaturase. | 0.410 |
AJG24171.1 | AJG21584.1 | RR42_s2589 | RR42_m4237 | Sensory box/GGDEF family protein. | O-antigen acetylase. | 0.425 |
AJG24171.1 | AJG21585.1 | RR42_s2589 | RR42_m4238 | Sensory box/GGDEF family protein. | Acyltransferase family protein. | 0.425 |