Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG17911.1 | AJG18808.1 | RR42_m0498 | RR42_m1406 | Hypothetical protein. | Superfamily II DNA and RNA helicase. | 0.519 |
AJG17911.1 | AJG18830.1 | RR42_m0498 | RR42_m1429 | Hypothetical protein. | Phage protein. | 0.694 |
AJG17911.1 | AJG21814.1 | RR42_m0498 | RR42_s0216 | Hypothetical protein. | Hypothetical protein; FIG00976570. | 0.534 |
AJG18808.1 | AJG17911.1 | RR42_m1406 | RR42_m0498 | Superfamily II DNA and RNA helicase. | Hypothetical protein. | 0.519 |
AJG18808.1 | AJG18830.1 | RR42_m1406 | RR42_m1429 | Superfamily II DNA and RNA helicase. | Phage protein. | 0.785 |
AJG18808.1 | AJG21814.1 | RR42_m1406 | RR42_s0216 | Superfamily II DNA and RNA helicase. | Hypothetical protein; FIG00976570. | 0.411 |
AJG18830.1 | AJG17911.1 | RR42_m1429 | RR42_m0498 | Phage protein. | Hypothetical protein. | 0.694 |
AJG18830.1 | AJG18808.1 | RR42_m1429 | RR42_m1406 | Phage protein. | Superfamily II DNA and RNA helicase. | 0.785 |
AJG18830.1 | AJG21814.1 | RR42_m1429 | RR42_s0216 | Phage protein. | Hypothetical protein; FIG00976570. | 0.548 |
AJG18830.1 | AJG23375.1 | RR42_m1429 | RR42_s1787 | Phage protein. | KfrA protein. | 0.441 |
AJG21814.1 | AJG17911.1 | RR42_s0216 | RR42_m0498 | Hypothetical protein; FIG00976570. | Hypothetical protein. | 0.534 |
AJG21814.1 | AJG18808.1 | RR42_s0216 | RR42_m1406 | Hypothetical protein; FIG00976570. | Superfamily II DNA and RNA helicase. | 0.411 |
AJG21814.1 | AJG18830.1 | RR42_s0216 | RR42_m1429 | Hypothetical protein; FIG00976570. | Phage protein. | 0.548 |
AJG21814.1 | AJG21815.1 | RR42_s0216 | RR42_s0217 | Hypothetical protein; FIG00976570. | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.505 |
AJG21814.1 | AJG23375.1 | RR42_s0216 | RR42_s1787 | Hypothetical protein; FIG00976570. | KfrA protein. | 0.411 |
AJG21815.1 | AJG21814.1 | RR42_s0217 | RR42_s0216 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hypothetical protein; FIG00976570. | 0.505 |
AJG23375.1 | AJG18830.1 | RR42_s1787 | RR42_m1429 | KfrA protein. | Phage protein. | 0.441 |
AJG23375.1 | AJG21814.1 | RR42_s1787 | RR42_s0216 | KfrA protein. | Hypothetical protein; FIG00976570. | 0.411 |