Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG18981.1 | AJG21831.1 | RR42_m1583 | RR42_s0235 | D-amino acid dehydrogenase small subunit. | Hypothetical protein; FIG00433630. | 0.460 |
AJG21494.1 | AJG21831.1 | RR42_m4146 | RR42_s0235 | Large extracellular alpha-helical protein. | Hypothetical protein; FIG00433630. | 0.426 |
AJG21830.1 | AJG21831.1 | RR42_s0234 | RR42_s0235 | Hypothetical protein. | Hypothetical protein; FIG00433630. | 0.448 |
AJG21831.1 | AJG18981.1 | RR42_s0235 | RR42_m1583 | Hypothetical protein; FIG00433630. | D-amino acid dehydrogenase small subunit. | 0.460 |
AJG21831.1 | AJG21494.1 | RR42_s0235 | RR42_m4146 | Hypothetical protein; FIG00433630. | Large extracellular alpha-helical protein. | 0.426 |
AJG21831.1 | AJG21830.1 | RR42_s0235 | RR42_s0234 | Hypothetical protein; FIG00433630. | Hypothetical protein. | 0.448 |
AJG21831.1 | AJG22725.1 | RR42_s0235 | RR42_s1136 | Hypothetical protein; FIG00433630. | MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. | 0.432 |
AJG21831.1 | AJG23684.1 | RR42_s0235 | RR42_s2102 | Hypothetical protein; FIG00433630. | Hypothetical protein; UPF0192. | 0.426 |
AJG21831.1 | era | RR42_s0235 | RR42_m2848 | Hypothetical protein; FIG00433630. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.446 |
AJG21831.1 | ndk | RR42_s0235 | RR42_m2667 | Hypothetical protein; FIG00433630. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.476 |
AJG22725.1 | AJG21831.1 | RR42_s1136 | RR42_s0235 | MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. | Hypothetical protein; FIG00433630. | 0.432 |
AJG23684.1 | AJG21831.1 | RR42_s2102 | RR42_s0235 | Hypothetical protein; UPF0192. | Hypothetical protein; FIG00433630. | 0.426 |
era | AJG21831.1 | RR42_m2848 | RR42_s0235 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein; FIG00433630. | 0.446 |
era | ndk | RR42_m2848 | RR42_m2667 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.805 |
ndk | AJG21831.1 | RR42_m2667 | RR42_s0235 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Hypothetical protein; FIG00433630. | 0.476 |
ndk | era | RR42_m2667 | RR42_m2848 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.805 |