STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG22061.1Outer membrane protein (porin). (352 aa)    
Predicted Functional Partners:
AJG18476.1
Outer membrane protein (porin).
  
  
  0.889
AJG23553.1
Outer membrane protein (porin).
  
  
  0.878
AJG18475.1
Outer membrane protein (porin).
  
  
  0.765
AJG22087.1
Putative transmembrane protein.
  
     0.747
AJG18537.1
Putative lipoprotein transmembrane.
  
     0.743
AJG21521.1
Thiol-disulfide isomerase.
  
     0.741
AJG18892.1
Granule-associated protein.
  
     0.733
AJG23528.1
Porin, Gram-negative type.
  
  
  0.733
AJG21733.1
Outer membrane protein (porin).
  
  
  0.723
AJG20634.1
Putative lipoprotein.
  
     0.699
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.