Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG18567.1 | AJG18568.1 | RR42_m1161 | RR42_m1162 | Putative hydrolase. | Cyclohexanone monooxygenase. | 0.613 |
AJG18567.1 | AJG20596.1 | RR42_m1161 | RR42_m3228 | Putative hydrolase. | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.514 |
AJG18567.1 | AJG22391.1 | RR42_m1161 | RR42_s0801 | Putative hydrolase. | Beta-ketoadipate enol-lactone hydrolase. | 0.488 |
AJG18567.1 | AJG23062.1 | RR42_m1161 | RR42_s1474 | Putative hydrolase. | Alpha/beta hydrolase fold. | 0.642 |
AJG18567.1 | AJG23994.1 | RR42_m1161 | RR42_s2412 | Putative hydrolase. | ChlD component of cobalt chelatase involved in B12 biosynthesis. | 0.414 |
AJG18568.1 | AJG18567.1 | RR42_m1162 | RR42_m1161 | Cyclohexanone monooxygenase. | Putative hydrolase. | 0.613 |
AJG18568.1 | AJG22391.1 | RR42_m1162 | RR42_s0801 | Cyclohexanone monooxygenase. | Beta-ketoadipate enol-lactone hydrolase. | 0.430 |
AJG20596.1 | AJG18567.1 | RR42_m3228 | RR42_m1161 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Putative hydrolase. | 0.514 |
AJG20596.1 | AJG22391.1 | RR42_m3228 | RR42_s0801 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Beta-ketoadipate enol-lactone hydrolase. | 0.514 |
AJG20596.1 | AJG23062.1 | RR42_m3228 | RR42_s1474 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Alpha/beta hydrolase fold. | 0.514 |
AJG22387.1 | AJG22389.1 | RR42_s0797 | RR42_s0799 | Long-chain-fatty-acid--CoA ligase. | Choline dehydrogenase. | 0.508 |
AJG22387.1 | AJG22390.1 | RR42_s0797 | RR42_s0800 | Long-chain-fatty-acid--CoA ligase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.536 |
AJG22387.1 | AJG22391.1 | RR42_s0797 | RR42_s0801 | Long-chain-fatty-acid--CoA ligase. | Beta-ketoadipate enol-lactone hydrolase. | 0.491 |
AJG22389.1 | AJG22387.1 | RR42_s0799 | RR42_s0797 | Choline dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.508 |
AJG22389.1 | AJG22390.1 | RR42_s0799 | RR42_s0800 | Choline dehydrogenase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.765 |
AJG22389.1 | AJG22391.1 | RR42_s0799 | RR42_s0801 | Choline dehydrogenase. | Beta-ketoadipate enol-lactone hydrolase. | 0.475 |
AJG22389.1 | AJG22392.1 | RR42_s0799 | RR42_s0802 | Choline dehydrogenase. | Cyclohexanone monooxygenase. | 0.614 |
AJG22390.1 | AJG22387.1 | RR42_s0800 | RR42_s0797 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Long-chain-fatty-acid--CoA ligase. | 0.536 |
AJG22390.1 | AJG22389.1 | RR42_s0800 | RR42_s0799 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Choline dehydrogenase. | 0.765 |
AJG22390.1 | AJG22391.1 | RR42_s0800 | RR42_s0801 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Beta-ketoadipate enol-lactone hydrolase. | 0.543 |
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