STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG22770.1Transcriptional regulator, IclR family. (258 aa)    
Predicted Functional Partners:
AJG19010.1
Transcriptional regulator, IclR family.
  
     0.773
AJG24417.1
Transcriptional regulator, IclR family.
  
     0.772
AJG18976.1
Transcriptional regulator, IclR family.
  
     0.771
AJG23230.1
Transcriptional regulator, IclR family.
  
     0.770
AJG23748.1
Transcriptional regulator, IclR family.
  
     0.768
AJG24275.1
Transcriptional regulator, IclR family.
  
     0.766
AJG24978.1
Transcriptional regulator, IclR family.
  
     0.762
AJG24032.1
Transcriptional regulator, IclR family.
  
     0.758
AJG17562.1
Transcriptional regulator, IclR family.
  
     0.749
AJG20993.1
Transcriptional regulator, IclR family.
  
     0.747
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.