STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG22961.1D-3-phosphoglycerate dehydrogenase. (334 aa)    
Predicted Functional Partners:
AJG21385.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
  0.930
AJG23592.1
Serine--glyoxylate aminotransferase.
  
 
 0.925
AJG24206.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
0.922
AJG20255.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
0.918
AJG19861.1
Isocitrate lyase.
   
 
 0.916
AJG22626.1
Isocitrate lyase.
   
 
 0.916
AJG17606.1
D-3-phosphoglycerate dehydrogenase.
  
  
 
0.912
AJG19856.1
Malate synthase; Belongs to the malate synthase family.
    
 0.911
AJG20246.1
Phosphoglycolate phosphatase-like, clustered with ribosomal large subunit pseudouridine synthase C.
    
 0.910
AJG20887.1
Glycolate dehydrogenase, subunit GlcD.
  
 
 0.910
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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