STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23060.1Putative exported protein. (335 aa)    
Predicted Functional Partners:
AJG23963.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.711
AJG18173.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.708
AJG20459.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.707
AJG24536.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.704
AJG20458.1
Tricarboxylate transport protein TctB.
 
  
 0.679
AJG24537.1
Tricarboxylate transport protein TctB.
 
  
 0.676
AJG22126.1
Tricarboxylate transport protein TctC.
  
     0.675
AJG23962.1
Tricarboxylate transport protein TctB.
 
  
 0.609
AJG23059.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.572
AJG21548.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.544
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.