Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG17606.1 | AJG17988.1 | RR42_m0191 | RR42_m0575 | D-3-phosphoglycerate dehydrogenase. | Lactoylglutathione lyase. | 0.907 |
AJG17606.1 | AJG18584.1 | RR42_m0191 | RR42_m1178 | D-3-phosphoglycerate dehydrogenase. | Threonine dehydratase, catabolic. | 0.852 |
AJG17606.1 | AJG20255.1 | RR42_m0191 | RR42_m2881 | D-3-phosphoglycerate dehydrogenase. | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.922 |
AJG17606.1 | AJG21436.1 | RR42_m0191 | RR42_m4088 | D-3-phosphoglycerate dehydrogenase. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.807 |
AJG17606.1 | AJG22961.1 | RR42_m0191 | RR42_s1373 | D-3-phosphoglycerate dehydrogenase. | D-3-phosphoglycerate dehydrogenase. | 0.912 |
AJG17606.1 | AJG23272.1 | RR42_m0191 | RR42_s1684 | D-3-phosphoglycerate dehydrogenase. | Low-specificity D-threonine aldolase. | 0.800 |
AJG17606.1 | AJG24322.1 | RR42_m0191 | RR42_s2741 | D-3-phosphoglycerate dehydrogenase. | L-serine dehydratase, (PLP)-dependent or Threonine dehydratase biosynthetic. | 0.852 |
AJG17606.1 | AJG24942.1 | RR42_m0191 | RR42_s3366 | D-3-phosphoglycerate dehydrogenase. | Chaperone protein hchA. | 0.905 |
AJG17606.1 | dsdA | RR42_m0191 | RR42_s1599 | D-3-phosphoglycerate dehydrogenase. | D-serine dehydratase; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | 0.800 |
AJG17606.1 | ilvA | RR42_m0191 | RR42_m0476 | D-3-phosphoglycerate dehydrogenase. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.852 |
AJG17988.1 | AJG17606.1 | RR42_m0575 | RR42_m0191 | Lactoylglutathione lyase. | D-3-phosphoglycerate dehydrogenase. | 0.907 |
AJG17988.1 | AJG18584.1 | RR42_m0575 | RR42_m1178 | Lactoylglutathione lyase. | Threonine dehydratase, catabolic. | 0.845 |
AJG17988.1 | AJG20255.1 | RR42_m0575 | RR42_m2881 | Lactoylglutathione lyase. | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.919 |
AJG17988.1 | AJG21436.1 | RR42_m0575 | RR42_m4088 | Lactoylglutathione lyase. | L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.804 |
AJG17988.1 | AJG22961.1 | RR42_m0575 | RR42_s1373 | Lactoylglutathione lyase. | D-3-phosphoglycerate dehydrogenase. | 0.907 |
AJG17988.1 | AJG23272.1 | RR42_m0575 | RR42_s1684 | Lactoylglutathione lyase. | Low-specificity D-threonine aldolase. | 0.810 |
AJG17988.1 | AJG24322.1 | RR42_m0575 | RR42_s2741 | Lactoylglutathione lyase. | L-serine dehydratase, (PLP)-dependent or Threonine dehydratase biosynthetic. | 0.845 |
AJG17988.1 | AJG24942.1 | RR42_m0575 | RR42_s3366 | Lactoylglutathione lyase. | Chaperone protein hchA. | 0.923 |
AJG17988.1 | dsdA | RR42_m0575 | RR42_s1599 | Lactoylglutathione lyase. | D-serine dehydratase; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | 0.805 |
AJG17988.1 | ilvA | RR42_m0575 | RR42_m0476 | Lactoylglutathione lyase. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.845 |
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