STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23484.1Alkyldihydroxyacetonephosphate synthase. (534 aa)    
Predicted Functional Partners:
AJG20776.1
Alkyldihydroxyacetonephosphate synthase.
  
  
 
0.926
AJG20889.1
Glycolate dehydrogenase, FAD-binding subunit GlcE.
 
  
 0.552
AJG23485.1
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
  
 0.535
AJG18357.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.486
AJG23779.1
Tungsten-containing formate dehydrogenase beta subunit.
   
 
 0.486
AJG18358.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.485
AJG21215.1
Glutamate synthase [NADPH] large chain.
     
 0.471
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.433
AJG23590.1
Glycolate dehydrogenase, subunit GlcD.
 
  
 0.424
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.418
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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