STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23566.1Isochorismatase family protein; FIG002283. (245 aa)    
Predicted Functional Partners:
AJG23568.1
Exoenzymes regulatory protein AepA precursor.
 
   
 0.918
AJG23570.1
Hypothetical protein; FIG026426.
 
    0.842
AJG23567.1
Non-heme chloroperoxidase.
 
 
 0.796
AJG23597.1
Exoenzymes regulatory protein AepA precursor.
 
   
 0.783
AJG23805.1
Exoenzymes regulatory protein AepA precursor.
 
   
 0.783
AJG23808.1
Hypothetical protein; FIG026426.
 
    0.722
AJG23596.1
Hypothetical protein; FIG026426.
 
    0.721
AJG23569.1
Membrane protein; FIG027115.
 
    0.716
AJG20903.1
Catalase; Belongs to the catalase family.
  
 
 0.456
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.455
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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