STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23740.1Iron uptake protein; FIG024006. (89 aa)    
Predicted Functional Partners:
AJG23742.1
Iron uptake protein; FIG016502.
 
    0.975
AJG23741.1
Iron-regulated membrane protein; FIG138928.
 
    0.953
AJG22869.1
Iron uptake protein; FIG016502.
 
    0.837
AJG22870.1
Iron-regulated membrane protein; FIG138928.
 
    0.812
AJG23746.1
Fe2+-dicitrate sensor, membrane component.
 
    0.709
AJG23745.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.662
AJG20395.1
Filamentous hemagglutinin family outer membrane protein associated with VreARI signaling system.
  
     0.645
AJG23747.1
TonB-dependent siderophore receptor.
 
  
 0.645
AJG20397.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.643
AJG20396.1
Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system.
 
    0.629
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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