STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23837.1Transcriptional regulator, GntR family. (238 aa)    
Predicted Functional Partners:
AJG18899.1
Transcriptional regulator, GntR family.
 
  
 0.787
AJG19670.1
Transcriptional regulator, GntR family.
 
  
 0.787
AJG23726.1
Transcriptional regulator, GntR family.
  
     0.749
AJG21695.1
Glycolate utilization operon transcriptional activator GlcC.
 
  
 0.730
AJG23838.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.568
AJG23836.1
Nitrilotriacetate monooxygenase component B.
       0.495
AJG22722.1
Transcriptional regulator, GntR family.
 
  
0.412
AJG23839.1
Putative exported protein.
       0.410
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.