STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG23841.1TPR repeat. (374 aa)    
Predicted Functional Partners:
AJG17785.1
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
 
 
 
 0.862
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.818
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.799
AJG24245.1
Ankyrin.
 
 0.784
AJG18501.1
Ankyrin repeat protein.
 
 0.783
AJG21897.1
High-affnity carbon uptake protein Hat/HatR.
 
 0.774
AJG20478.1
Ankyrin.
 
 0.770
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.763
AJG19586.1
Ankyrin repeat protein.
 
 0.737
AJG22808.1
Hypothetical protein.
  
 0.706
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.