STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG24813.1Putative transmembrane protein. (437 aa)    
Predicted Functional Partners:
AJG24814.1
Putative esterase.
 
     0.882
AJG19383.1
Biofilm PGA outer membrane secretin PgaA.
  
     0.765
AJG21409.1
Outer membrane porin protein 32 precursor.
  
     0.724
AJG23421.1
Outer membrane porin protein 32 precursor.
  
     0.724
AJG22112.1
Phosphoprotein phosphatase.
  
   
 0.713
AJG21565.1
Superfamily I DNA and RNA helicase.
  
     0.664
AJG24173.1
YapH protein.
  
     0.660
AJG22422.1
Transcriptional regulator, IclR family.
  
     0.649
AJG21974.1
Membrane protein; FIG028593.
  
     0.632
AJG19384.1
Biofilm PGA synthesis deacetylase PgaB.
  
     0.626
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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