Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJG19383.1 | AJG19384.1 | RR42_m1988 | RR42_m1989 | Biofilm PGA outer membrane secretin PgaA. | Biofilm PGA synthesis deacetylase PgaB. | 0.953 |
AJG19383.1 | AJG21409.1 | RR42_m1988 | RR42_m4060 | Biofilm PGA outer membrane secretin PgaA. | Outer membrane porin protein 32 precursor. | 0.556 |
AJG19383.1 | AJG21565.1 | RR42_m1988 | RR42_m4218 | Biofilm PGA outer membrane secretin PgaA. | Superfamily I DNA and RNA helicase. | 0.542 |
AJG19383.1 | AJG21974.1 | RR42_m1988 | RR42_s0378 | Biofilm PGA outer membrane secretin PgaA. | Membrane protein; FIG028593. | 0.628 |
AJG19383.1 | AJG22112.1 | RR42_m1988 | RR42_s0519 | Biofilm PGA outer membrane secretin PgaA. | Phosphoprotein phosphatase. | 0.452 |
AJG19383.1 | AJG22422.1 | RR42_m1988 | RR42_s0832 | Biofilm PGA outer membrane secretin PgaA. | Transcriptional regulator, IclR family. | 0.661 |
AJG19383.1 | AJG23421.1 | RR42_m1988 | RR42_s1833 | Biofilm PGA outer membrane secretin PgaA. | Outer membrane porin protein 32 precursor. | 0.556 |
AJG19383.1 | AJG24173.1 | RR42_m1988 | RR42_s2591 | Biofilm PGA outer membrane secretin PgaA. | YapH protein. | 0.671 |
AJG19383.1 | AJG24813.1 | RR42_m1988 | RR42_s3237 | Biofilm PGA outer membrane secretin PgaA. | Putative transmembrane protein. | 0.765 |
AJG19383.1 | AJG24814.1 | RR42_m1988 | RR42_s3238 | Biofilm PGA outer membrane secretin PgaA. | Putative esterase. | 0.556 |
AJG19384.1 | AJG19383.1 | RR42_m1989 | RR42_m1988 | Biofilm PGA synthesis deacetylase PgaB. | Biofilm PGA outer membrane secretin PgaA. | 0.953 |
AJG19384.1 | AJG21974.1 | RR42_m1989 | RR42_s0378 | Biofilm PGA synthesis deacetylase PgaB. | Membrane protein; FIG028593. | 0.419 |
AJG19384.1 | AJG22422.1 | RR42_m1989 | RR42_s0832 | Biofilm PGA synthesis deacetylase PgaB. | Transcriptional regulator, IclR family. | 0.400 |
AJG19384.1 | AJG24813.1 | RR42_m1989 | RR42_s3237 | Biofilm PGA synthesis deacetylase PgaB. | Putative transmembrane protein. | 0.626 |
AJG19384.1 | AJG24814.1 | RR42_m1989 | RR42_s3238 | Biofilm PGA synthesis deacetylase PgaB. | Putative esterase. | 0.411 |
AJG21409.1 | AJG19383.1 | RR42_m4060 | RR42_m1988 | Outer membrane porin protein 32 precursor. | Biofilm PGA outer membrane secretin PgaA. | 0.556 |
AJG21409.1 | AJG22112.1 | RR42_m4060 | RR42_s0519 | Outer membrane porin protein 32 precursor. | Phosphoprotein phosphatase. | 0.720 |
AJG21409.1 | AJG24173.1 | RR42_m4060 | RR42_s2591 | Outer membrane porin protein 32 precursor. | YapH protein. | 0.672 |
AJG21409.1 | AJG24813.1 | RR42_m4060 | RR42_s3237 | Outer membrane porin protein 32 precursor. | Putative transmembrane protein. | 0.724 |
AJG21565.1 | AJG19383.1 | RR42_m4218 | RR42_m1988 | Superfamily I DNA and RNA helicase. | Biofilm PGA outer membrane secretin PgaA. | 0.542 |
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