STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJG24978.1Transcriptional regulator, IclR family. (287 aa)    
Predicted Functional Partners:
AJG24979.1
Putative cyclase SCIF3.09c.
 
    0.779
AJG18976.1
Transcriptional regulator, IclR family.
  
     0.769
AJG23874.1
Transcriptional regulator, IclR family.
  
     0.765
AJG24259.1
Transcriptional regulator, IclR family.
  
     0.765
AJG20141.1
Transcriptional regulator, IclR family.
  
     0.764
AJG20156.1
Transcriptional regulator, IclR family.
  
     0.763
AJG22770.1
Transcriptional regulator, IclR family.
  
     0.762
AJG20388.1
Transcriptional regulator, IclR family.
  
     0.761
AJG23748.1
Transcriptional regulator, IclR family.
  
     0.761
AJG24275.1
Transcriptional regulator, IclR family.
  
     0.758
Your Current Organism:
Cupriavidus basilensis
NCBI taxonomy Id: 68895
Other names: C. basilensis, CCUG 49340, DSM 11853, LMG 18990, LMG 19474, LMG:18990, LMG:19474, Ralstonia basilensis, Wautersia basilensis, strain RK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.