Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
appA_3 | dosC_1 | VME0621_00026 | VME0621_00025 | Oligopeptide-binding protein AppA precursor. | Diguanylate cyclase DosC. | 0.459 |
appA_3 | gsiA_2 | VME0621_00026 | VME0621_00029 | Oligopeptide-binding protein AppA precursor. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.943 |
appA_3 | gsiA_3 | VME0621_00026 | VME0621_00805 | Oligopeptide-binding protein AppA precursor. | Glutathione import ATP-binding protein GsiA. | 0.686 |
appA_3 | gsiA_5 | VME0621_00026 | VME0621_04874 | Oligopeptide-binding protein AppA precursor. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.504 |
appA_3 | yejB | VME0621_00026 | VME0621_00027 | Oligopeptide-binding protein AppA precursor. | Inner membrane ABC transporter permease protein YejB. | 0.965 |
appA_3 | yejE | VME0621_00026 | VME0621_00028 | Oligopeptide-binding protein AppA precursor. | Inner membrane ABC transporter permease protein YejE. | 0.962 |
dosC_1 | appA_3 | VME0621_00025 | VME0621_00026 | Diguanylate cyclase DosC. | Oligopeptide-binding protein AppA precursor. | 0.459 |
dosC_1 | gsiA_2 | VME0621_00025 | VME0621_00029 | Diguanylate cyclase DosC. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.445 |
dosC_1 | yejB | VME0621_00025 | VME0621_00027 | Diguanylate cyclase DosC. | Inner membrane ABC transporter permease protein YejB. | 0.453 |
dosC_1 | yejE | VME0621_00025 | VME0621_00028 | Diguanylate cyclase DosC. | Inner membrane ABC transporter permease protein YejE. | 0.453 |
dppC_1 | gsiA_2 | VME0621_02173 | VME0621_00029 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.738 |
dppC_1 | gsiA_3 | VME0621_02173 | VME0621_00805 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA. | 0.763 |
dppC_1 | gsiA_5 | VME0621_02173 | VME0621_04874 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.872 |
dppC_1 | yejB | VME0621_02173 | VME0621_00027 | Dipeptide transport system permease protein DppC. | Inner membrane ABC transporter permease protein YejB. | 0.513 |
dppC_2 | gsiA_2 | VME0621_04877 | VME0621_00029 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.819 |
dppC_2 | gsiA_3 | VME0621_04877 | VME0621_00805 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA. | 0.831 |
dppC_2 | gsiA_5 | VME0621_04877 | VME0621_04874 | Dipeptide transport system permease protein DppC. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.948 |
dppC_2 | yejB | VME0621_04877 | VME0621_00027 | Dipeptide transport system permease protein DppC. | Inner membrane ABC transporter permease protein YejB. | 0.645 |
gsiA_2 | appA_3 | VME0621_00029 | VME0621_00026 | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | Oligopeptide-binding protein AppA precursor. | 0.943 |
gsiA_2 | dosC_1 | VME0621_00029 | VME0621_00025 | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | Diguanylate cyclase DosC. | 0.445 |
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