Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBO08198.1 | SBO08199.1 | VME0621_00290 | VME0621_00291 | Hypothetical protein. | Hypothetical protein. | 0.956 |
SBO08198.1 | SBO09863.1 | VME0621_00290 | VME0621_01966 | Hypothetical protein. | Hypothetical protein. | 0.825 |
SBO08198.1 | bigR_1 | VME0621_00290 | VME0621_00292 | Hypothetical protein. | Biofilm growth-associated repressor. | 0.579 |
SBO08198.1 | cdr_1 | VME0621_00290 | VME0621_00293 | Hypothetical protein. | Coenzyme A disulfide reductase. | 0.464 |
SBO08198.1 | tusA | VME0621_00290 | VME0621_05007 | Hypothetical protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.700 |
SBO08199.1 | SBO08198.1 | VME0621_00291 | VME0621_00290 | Hypothetical protein. | Hypothetical protein. | 0.956 |
SBO08199.1 | bigR_1 | VME0621_00291 | VME0621_00292 | Hypothetical protein. | Biofilm growth-associated repressor. | 0.586 |
SBO08199.1 | cdr_1 | VME0621_00291 | VME0621_00293 | Hypothetical protein. | Coenzyme A disulfide reductase. | 0.468 |
SBO08199.1 | tusA | VME0621_00291 | VME0621_05007 | Hypothetical protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.700 |
SBO09863.1 | SBO08198.1 | VME0621_01966 | VME0621_00290 | Hypothetical protein. | Hypothetical protein. | 0.825 |
SBO09863.1 | tusA | VME0621_01966 | VME0621_05007 | Hypothetical protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.700 |
bigR_1 | SBO08198.1 | VME0621_00292 | VME0621_00290 | Biofilm growth-associated repressor. | Hypothetical protein. | 0.579 |
bigR_1 | SBO08199.1 | VME0621_00292 | VME0621_00291 | Biofilm growth-associated repressor. | Hypothetical protein. | 0.586 |
bigR_1 | cdr_1 | VME0621_00292 | VME0621_00293 | Biofilm growth-associated repressor. | Coenzyme A disulfide reductase. | 0.594 |
cdr_1 | SBO08198.1 | VME0621_00293 | VME0621_00290 | Coenzyme A disulfide reductase. | Hypothetical protein. | 0.464 |
cdr_1 | SBO08199.1 | VME0621_00293 | VME0621_00291 | Coenzyme A disulfide reductase. | Hypothetical protein. | 0.468 |
cdr_1 | bigR_1 | VME0621_00293 | VME0621_00292 | Coenzyme A disulfide reductase. | Biofilm growth-associated repressor. | 0.594 |
cdr_1 | tusA | VME0621_00293 | VME0621_05007 | Coenzyme A disulfide reductase. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.563 |
tusA | SBO08198.1 | VME0621_05007 | VME0621_00290 | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.700 |
tusA | SBO08199.1 | VME0621_05007 | VME0621_00291 | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.700 |
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